Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04775 | Not Available | Positive | 4727600 - 4727776 | 6883.05 |
| outer membrane porin, oprd family | HMPREF3212_04776 | Not Available | Positive | 4727884 - 4729290 | 52710.7 |
| hypothetical protein | HMPREF3212_04777 | Not Available | Positive | 4729340 - 4729672 | 12153.5 |
| citrate transporter | HMPREF3212_04778 | Not Available | Negative | 4729724 - 4731019 | 47071.5 |
| citb domain protein | HMPREF3212_04779 | Not Available | Negative | 4731073 - 4732212 | 41922.9 |
| precorrin 3b synthase cobz | HMPREF3212_04780 | Not Available | Negative | 4732199 - 4733620 | 52108.9 |
| lysr substrate binding domain protein | HMPREF3212_04781 | Not Available | Negative | 4733700 - 4734626 | 33450.8 |
| hypothetical protein | HMPREF3212_04782 | Not Available | Negative | 4734662 - 4734781 | 4194.29 |
| ferric uptake regulation protein | HMPREF3212_04783 | Not Available | Negative | 4734756 - 4735202 | 16767.8 |
| hypothetical protein | HMPREF3212_04784 | Not Available | Negative | 4735336 - 4735485 | 5484.43 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

