Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4716786 - 4716870 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4716880 - 4716956 | Not Available |
| asparagine synthase | HMPREF3212_04767 | Not Available | Negative | 4717181 - 4718845 | 62551.1 |
| had hydrolase, family iia | HMPREF3212_04769 | Not Available | Negative | 4719145 - 4719897 | 27161.7 |
| hypothetical protein | HMPREF3212_04768 | Not Available | Positive | 4719896 - 4720057 | 6174.47 |
| putative protein mlc | HMPREF3212_04770 | Not Available | Negative | 4720064 - 4721284 | 44523.1 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF3212_04771 | Not Available | Negative | 4721293 - 4722441 | 40894.4 |
| glucosamine-6-phosphate deaminase | HMPREF3212_04772 | Not Available | Negative | 4722502 - 4723302 | 29632.6 |
| pts system, n-acetylglucosamine-specific iibc component | HMPREF3212_04773 | Not Available | Positive | 4723645 - 4725594 | 68019.6 |
| glutamine--trna ligase | HMPREF3212_04774 | Not Available | Positive | 4725781 - 4727448 | 63567.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

