Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antimicrobial peptide resistance and lipid a acylation protein pagp | HMPREF3212_04725 | Not Available | Positive | 4685010 - 4685573 | 21983.8 |
| cold shock protein cspe | HMPREF3212_04726 | Not Available | Positive | 4685670 - 4685972 | 11025.4 |
| protein crcb | HMPREF3212_04727 | Not Available | Negative | 4686024 - 4686347 | 11661.5 |
| hydrolase, carbon-nitrogen family | HMPREF3212_04728 | Not Available | Positive | 4686498 - 4687286 | 28002.1 |
| twin arginine translocase protein e | HMPREF3212_04729 | Not Available | Positive | 4687415 - 4687618 | 7071.68 |
| lipoyl synthase | HMPREF3212_04730 | Not Available | Negative | 4687717 - 4688682 | 35923.6 |
| hypothetical protein | HMPREF3212_04731 | Not Available | Negative | 4688723 - 4688899 | 6550.09 |
| lipoyl(octanoyl) transferase | HMPREF3212_04732 | Not Available | Negative | 4688889 - 4689554 | 24544.7 |
| hypothetical protein | HMPREF3212_04733 | Not Available | Negative | 4689645 - 4689908 | 9786.82 |
| d-alanyl-d-alanine carboxypeptidase daca | HMPREF3212_04734 | Not Available | Negative | 4690015 - 4691226 | 44413.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

