Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04625 | Not Available | Positive | 4572280 - 4572405 | 4797.6 |
| type-1 fimbrial protein, a chain | HMPREF3212_04626 | Not Available | Positive | 4572371 - 4572949 | 19353.8 |
| fimbrial protein | HMPREF3212_04627 | Not Available | Positive | 4573018 - 4573560 | 19425.4 |
| gram-negative pili assembly chaperone domain protein | HMPREF3212_04628 | Not Available | Positive | 4573602 - 4574294 | 25082.4 |
| fimbrial usher protein | HMPREF3212_04629 | Not Available | Positive | 4574302 - 4576923 | 95455.5 |
| putative protein fimh | HMPREF3212_04630 | Not Available | Positive | 4576928 - 4577935 | 36282.1 |
| fimbrial protein | HMPREF3212_04631 | Not Available | Positive | 4577928 - 4578464 | 18575.9 |
| putative positive transcription regulator bvga | HMPREF3212_04632 | Not Available | Negative | 4578514 - 4579146 | 23625.9 |
| hypothetical protein | HMPREF3212_04633 | Not Available | Negative | 4579202 - 4579321 | 4880.22 |
| hypothetical protein | HMPREF3212_04634 | Not Available | Negative | 4579734 - 4580513 | 30636.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

