Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | HMPREF3212_04615 | Not Available | Positive | 4564481 - 4565374 | 31754.3 |
| phosphoribosylaminoimidazole carboxylase, atpase subunit | HMPREF3212_04616 | Not Available | Negative | 4565411 - 4566478 | 39275.3 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | HMPREF3212_04617 | Not Available | Negative | 4566475 - 4566984 | 17725.3 |
| udp-2,3-diacylglucosamine hydrolase | HMPREF3212_04618 | Not Available | Negative | 4567223 - 4567945 | 26751.4 |
| peptidyl-prolyl cis-trans isomerase cyp18 | HMPREF3212_04619 | Not Available | Negative | 4567948 - 4568442 | 18175.5 |
| cysteine--trna ligase | HMPREF3212_04620 | Not Available | Positive | 4568616 - 4570001 | 52114.7 |
| putative membrane-bound metal-dependent hydrolase | HMPREF3212_04622 | Not Available | Negative | 4570093 - 4570617 | 19527.6 |
| hypothetical protein | HMPREF3212_04621 | Not Available | Positive | 4570597 - 4570740 | 5345.14 |
| hypothetical protein | HMPREF3212_04623 | Not Available | Negative | 4570743 - 4570955 | 7434.06 |
| tetrahydrofolate dehydrogenase/cyclohydrolase, nad(p)-binding domain protein | HMPREF3212_04624 | Not Available | Negative | 4570957 - 4571823 | 30940.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

