Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs1 nucleoside transporter family protein | HMPREF3212_04605 | Not Available | Positive | 4551799 - 4553259 | 52494.4 |
| allantoinase | HMPREF3212_04606 | Not Available | Positive | 4553332 - 4554693 | 49984.9 |
| putative permease | HMPREF3212_04607 | Not Available | Positive | 4554746 - 4556050 | 47332.7 |
| glycerate kinase | HMPREF3212_04608 | Not Available | Positive | 4556069 - 4557220 | 39268.9 |
| putative allantoin catabolism protein | HMPREF3212_04609 | Not Available | Negative | 4557301 - 4558086 | 28765.0 |
| allantoate amidohydrolase | HMPREF3212_04610 | Not Available | Negative | 4558097 - 4559332 | 45679.2 |
| ureidoglycolate dehydrogenase | HMPREF3212_04611 | Not Available | Negative | 4559354 - 4560403 | 37878.3 |
| membrane protein fdra | HMPREF3212_04612 | Not Available | Positive | 4560720 - 4562387 | 58758.5 |
| hypothetical protein | HMPREF3212_04613 | Not Available | Positive | 4562397 - 4563656 | 44978.7 |
| hypothetical protein | HMPREF3212_04614 | Not Available | Positive | 4563668 - 4564477 | 29504.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

