Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HMPREF3212_04595 | Not Available | Positive | 4541382 - 4542398 | 36442.5 |
| abc transporter, permease protein | HMPREF3212_04596 | Not Available | Positive | 4542391 - 4543050 | 23729.8 |
| trna 2-selenouridine synthase | HMPREF3212_04597 | Not Available | Negative | 4543051 - 4544145 | 41244.3 |
| hth-type transcriptional activator alls | HMPREF3212_04598 | Not Available | Negative | 4544215 - 4545141 | 34080.0 |
| ureidoglycolate lyase | HMPREF3212_04599 | Not Available | Positive | 4545276 - 4545851 | 21616.7 |
| hth-type transcriptional repressor allr | HMPREF3212_04600 | Not Available | Positive | 4545897 - 4546748 | 30588.0 |
| glyoxylate carboligase | HMPREF3212_04601 | Not Available | Positive | 4546833 - 4548614 | 64907.7 |
| hydroxypyruvate isomerase | HMPREF3212_04602 | Not Available | Positive | 4548654 - 4549403 | 28142.6 |
| 2-hydroxy-3-oxopropionate reductase | HMPREF3212_04603 | Not Available | Positive | 4549492 - 4550382 | 31379.3 |
| transporter, major facilitator family protein | HMPREF3212_04604 | Not Available | Positive | 4550379 - 4551701 | 46893.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

