Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia transporter | HMPREF3212_04533 | Not Available | Positive | 4478413 - 4479699 | 44391.1 |
| acyl-coa thioesterase ii | HMPREF3212_04534 | Not Available | Negative | 4479750 - 4480610 | 32258.5 |
| hypothetical protein | HMPREF3212_04535 | Not Available | Positive | 4480823 - 4481392 | 19433.3 |
| 6-o-methylguanine dna methyltransferase, dna binding domain protein | HMPREF3212_04536 | Not Available | Negative | 4481424 - 4481738 | 11554.9 |
| hypothetical protein | HMPREF3212_04538 | Not Available | Positive | 4482194 - 4482445 | 9256.18 |
| hypothetical protein | HMPREF3212_04539 | Not Available | Negative | 4482460 - 4482684 | 8114.81 |
| transcriptional regulator, gntr family | HMPREF3212_04540 | Not Available | Negative | 4482720 - 4484117 | 51125.7 |
| hypothetical protein | HMPREF3212_04541 | Not Available | Positive | 4484235 - 4484864 | 22161.0 |
| hypothetical protein | HMPREF3212_04542 | Not Available | Positive | 4484929 - 4485282 | 13251.9 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3212_04543 | Not Available | Negative | 4485334 - 4486860 | 57638.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

