Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ampg | HMPREF3212_04513 | Not Available | Negative | 4456043 - 4457518 | 53627.9 |
| hypothetical protein | HMPREF3212_04514 | Not Available | Negative | 4457563 - 4458141 | 20839.2 |
| protein bola | HMPREF3212_04515 | Not Available | Positive | 4458411 - 4458764 | 13261.8 |
| trigger factor | HMPREF3212_04516 | Not Available | Positive | 4459108 - 4460406 | 47993.1 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | HMPREF3212_04517 | Not Available | Positive | 4460546 - 4461277 | 27196.7 |
| hypothetical protein | HMPREF3212_04519 | Not Available | Negative | 4461274 - 4461405 | 4710.88 |
| atp-dependent clp protease, atp-binding subunit clpx | HMPREF3212_04518 | Not Available | Positive | 4461404 - 4462678 | 46264.6 |
| endopeptidase la | HMPREF3212_04520 | Not Available | Positive | 4462863 - 4465217 | 87367.2 |
| dna-binding protein hu-beta | HMPREF3212_04521 | Not Available | Positive | 4465426 - 4465698 | 9196.06 |
| peptidyl-prolyl cis-trans isomerase d | HMPREF3212_04522 | Not Available | Positive | 4465966 - 4467840 | 67919.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

