Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein ribd | HMPREF3212_04493 | Not Available | Positive | 4436350 - 4437453 | 40201.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF3212_04494 | Not Available | Positive | 4437544 - 4438014 | 16143.4 |
| transcription antitermination factor nusb | HMPREF3212_04495 | Not Available | Positive | 4438034 - 4438453 | 15689.9 |
| thiamine-phosphate kinase | HMPREF3212_04496 | Not Available | Positive | 4438531 - 4439508 | 34894.4 |
| phosphatidylglycerophosphatase a | HMPREF3212_04497 | Not Available | Positive | 4439486 - 4440004 | 19452.2 |
| oxidoreductase, aldo/keto reductase family protein | HMPREF3212_04498 | Not Available | Negative | 4440108 - 4441082 | 36293.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF3212_04499 | Not Available | Negative | 4441139 - 4443001 | 67638.9 |
| polyprenyl synthetase | HMPREF3212_04500 | Not Available | Negative | 4443026 - 4443925 | 32064.3 |
| exodeoxyribonuclease vii, small subunit | HMPREF3212_04501 | Not Available | Negative | 4443926 - 4444168 | 8894.39 |
| thiamine biosynthesis/trna modification protein thii | HMPREF3212_04502 | Not Available | Positive | 4444365 - 4445813 | 54857.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

