Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF3212_04483 | Not Available | Positive | 4427281 - 4428351 | 39430.1 |
| pp_04396 | HMPREF3212_04484 | Not Available | Positive | 4428407 - 4429534 | Not Available |
| preprotein translocase, yajc subunit | HMPREF3212_04485 | Not Available | Positive | 4429557 - 4429889 | 11845.8 |
| export membrane protein secd | HMPREF3212_04486 | Not Available | Positive | 4429950 - 4431764 | 65112.1 |
| export membrane protein secf | HMPREF3212_04487 | Not Available | Positive | 4431730 - 4432746 | 36810.1 |
| glyoxalase family protein | HMPREF3212_04488 | Not Available | Positive | 4432915 - 4433280 | 13000.5 |
| hth domain protein | HMPREF3212_04489 | Not Available | Positive | 4433304 - 4433996 | 26575.9 |
| nucleoside-specific channel-forming protein tsx | HMPREF3212_04490 | Not Available | Negative | 4434042 - 4434905 | 32708.6 |
| hypothetical protein | HMPREF3212_04492 | Not Available | Negative | 4435204 - 4435902 | 25667.9 |
| transcriptional regulator nrdr | HMPREF3212_04491 | Not Available | Positive | 4435897 - 4436346 | 17212.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

