Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lysine-specific permease | HMPREF3212_04433 | Not Available | Positive | 4372472 - 4373875 | 50528.7 |
| homocysteine s-methyltransferase | HMPREF3212_04434 | Not Available | Positive | 4373862 - 4374794 | 33500.5 |
| abc transporter, atp-binding protein | HMPREF3212_04435 | Not Available | Negative | 4374903 - 4375961 | 39682.9 |
| abc transporter, permease protein | HMPREF3212_04436 | Not Available | Negative | 4375961 - 4378039 | 75876.1 |
| abc transporter, solute-binding protein | HMPREF3212_04437 | Not Available | Negative | 4378109 - 4379140 | 37498.6 |
| membrane protein regulates uhpt expression | HMPREF3212_04438 | Not Available | Negative | 4379137 - 4380372 | 45123.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3212_04439 | Not Available | Negative | 4380527 - 4382068 | 58106.5 |
| dna-binding response regulator in two-component regulatory system wtih uhpb family protein | HMPREF3212_04440 | Not Available | Negative | 4382068 - 4382844 | 28284.3 |
| taurine abc transporter, periplasmic binding protein | HMPREF3212_04441 | Not Available | Positive | 4383033 - 4383995 | 34270.8 |
| abc transporter, atp-binding protein | HMPREF3212_04442 | Not Available | Positive | 4384010 - 4384777 | 28011.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

