Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04423 | Not Available | Negative | 4362647 - 4363168 | 19674.4 |
| antibiotic biosynthesis monooxygenase | HMPREF3212_04424 | Not Available | Negative | 4363188 - 4363493 | 11846.2 |
| iclr helix-turn-helix protein | HMPREF3212_04425 | Not Available | Negative | 4363629 - 4364447 | 30732.3 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | HMPREF3212_04426 | Not Available | Positive | 4364633 - 4366297 | 61815.7 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | HMPREF3212_04427 | Not Available | Positive | 4366299 - 4367243 | 34092.8 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | HMPREF3212_04428 | Not Available | Positive | 4367257 - 4368138 | 32656.1 |
| putative 2-oxopent-4-enoate hydratase | HMPREF3212_04429 | Not Available | Positive | 4368148 - 4368957 | 28957.5 |
| acetaldehyde dehydrogenase | HMPREF3212_04430 | Not Available | Positive | 4368954 - 4369904 | 33134.2 |
| 4-hydroxy-2-oxovalerate aldolase | HMPREF3212_04431 | Not Available | Positive | 4369901 - 4370914 | 36517.7 |
| transporter, major facilitator family protein | HMPREF3212_04432 | Not Available | Positive | 4371055 - 4372197 | 39062.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

