Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04383 | Not Available | Negative | 4317260 - 4317517 | 9626.72 |
| hypothetical protein | HMPREF3212_04384 | Not Available | Negative | 4318542 - 4318715 | 6526.4 |
| peptidase t | HMPREF3212_04385 | Not Available | Positive | 4318835 - 4320091 | 45677.2 |
| putative anaerobic c4-dicarboxylate transporter dcuc | HMPREF3212_04386 | Not Available | Positive | 4320088 - 4321449 | 47668.4 |
| hypothetical protein | HMPREF3212_04387 | Not Available | Positive | 4321898 - 4322401 | 19763.0 |
| hypothetical protein | HMPREF3212_04388 | Not Available | Positive | 4322498 - 4322734 | 8905.75 |
| tat pathway signal sequence domain protein | HMPREF3212_04389 | Not Available | Negative | 4322836 - 4323465 | 22409.2 |
| lysr substrate binding domain protein | HMPREF3212_04390 | Not Available | Positive | 4323575 - 4324480 | 33487.4 |
| transcriptional regulator, arac family | HMPREF3212_04391 | Not Available | Positive | 4324605 - 4325588 | 36913.2 |
| putative ferric malleobactin receptor fmta | HMPREF3212_04392 | Not Available | Positive | 4325710 - 4327818 | 78538.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

