Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | HMPREF3212_04373 | Not Available | Positive | 4303665 - 4305053 | 50625.6 |
| atpase, aaa family | HMPREF3212_04374 | Not Available | Negative | 4305213 - 4309541 | 161726.0 |
| hypothetical protein | HMPREF3212_04375 | Not Available | Negative | 4309548 - 4311137 | 56533.2 |
| hypothetical protein | HMPREF3212_04376 | Not Available | Positive | 4311141 - 4311302 | 6089.75 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3212_04377 | Not Available | Negative | 4311642 - 4313864 | 84056.0 |
| hypothetical protein | HMPREF3212_04378 | Not Available | Positive | 4313942 - 4314103 | 6130.81 |
| hypothetical protein | HMPREF3212_04379 | Not Available | Negative | 4314368 - 4315429 | 38612.6 |
| hypothetical protein | HMPREF3212_04380 | Not Available | Positive | 4315735 - 4315887 | 5375.45 |
| intracellular protease, pfpi family | HMPREF3212_04381 | Not Available | Positive | 4315884 - 4316447 | 20449.4 |
| methyltransferase domain protein | HMPREF3212_04382 | Not Available | Negative | 4316503 - 4317150 | 23779.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

