Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase, b-type cytochrome subunit | HMPREF3212_04363 | Not Available | Negative | 4293555 - 4294289 | 28401.6 |
| membrane-bound hydrogenase 1 large subunit | HMPREF3212_04364 | Not Available | Negative | 4294308 - 4296101 | 66471.5 |
| hydrogenase-1 small chain | HMPREF3212_04365 | Not Available | Negative | 4296098 - 4297225 | 40974.9 |
| fad dependent oxidoreductase | HMPREF3212_04366 | Not Available | Negative | 4297434 - 4298570 | 42071.5 |
| hypothetical protein | HMPREF3212_04367 | Not Available | Positive | 4298580 - 4298720 | 4873.76 |
| putative aldehyde dehydrogenase dhas | HMPREF3212_04368 | Not Available | Negative | 4298717 - 4300204 | 53592.6 |
| hth-type transcriptional regulator puur | HMPREF3212_04369 | Not Available | Negative | 4300343 - 4300900 | 20007.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | HMPREF3212_04370 | Not Available | Negative | 4300926 - 4301690 | 27870.4 |
| glutamate--ammonia ligase, catalytic domain protein | HMPREF3212_04371 | Not Available | Positive | 4301903 - 4303321 | 53009.1 |
| hypothetical protein | HMPREF3212_04372 | Not Available | Negative | 4303381 - 4303521 | 5390.65 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

