Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04333 | Not Available | Positive | 4262569 - 4263828 | 47453.9 |
| sigma factor-binding protein crl | HMPREF3212_04334 | Not Available | Positive | 4263886 - 4264287 | 15566.6 |
| outer membrane protein | HMPREF3212_04335 | Not Available | Negative | 4264344 - 4265405 | 39156.3 |
| glutamate 5-kinase | HMPREF3212_04336 | Not Available | Positive | 4265689 - 4266792 | 39072.9 |
| glutamate-5-semialdehyde dehydrogenase | HMPREF3212_04337 | Not Available | Positive | 4266804 - 4268057 | 44629.7 |
| cyclic nucleotide-binding domain protein | HMPREF3212_04338 | Not Available | Positive | 4268280 - 4269047 | 28925.3 |
| hypothetical protein | HMPREF3212_04339 | Not Available | Negative | 4269040 - 4269198 | 6406.78 |
| fimbrillin matb | HMPREF3212_04340 | Not Available | Positive | 4269643 - 4270230 | 20173.1 |
| putative uncharacterized protein matc | HMPREF3212_04341 | Not Available | Positive | 4270283 - 4270960 | 24854.9 |
| hypothetical protein | HMPREF3212_04342 | Not Available | Positive | 4271013 - 4273511 | 91546.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

