Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein flir | HMPREF3212_04283 | Not Available | Negative | 4219660 - 4220442 | 28749.4 |
| putative flagellar biosynthetic protein fliq | HMPREF3212_04284 | Not Available | Negative | 4220444 - 4220716 | 9654.52 |
| flagellar biosynthetic protein flip | HMPREF3212_04285 | Not Available | Negative | 4220729 - 4221487 | 27435.2 |
| putative flagellar motor switch protein flin | HMPREF3212_04286 | Not Available | Negative | 4221484 - 4221855 | 13601.4 |
| surface presentation of antigens protein | HMPREF3212_04287 | Not Available | Negative | 4221848 - 4222630 | 29442.7 |
| hypothetical protein | HMPREF3212_04288 | Not Available | Negative | 4222698 - 4222841 | 5353.37 |
| sigma-54 interaction domain protein | HMPREF3212_04289 | Not Available | Positive | 4223306 - 4224292 | 36571.4 |
| flagellar hook-basal body complex protein flie | HMPREF3212_04290 | Not Available | Positive | 4224340 - 4224702 | 12769.4 |
| flagellar m-ring protein flif | HMPREF3212_04291 | Not Available | Positive | 4224707 - 4226386 | 60982.6 |
| flig domain protein | HMPREF3212_04292 | Not Available | Positive | 4226364 - 4227380 | 38309.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

