Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_04263 | Not Available | Negative | 4197910 - 4198440 | 19842.7 |
| transcriptional regulatory protein | HMPREF3212_04264 | Not Available | Negative | 4198430 - 4199218 | 29362.6 |
| major fimbrial subunit | HMPREF3212_04265 | Not Available | Positive | 4199864 - 4200412 | 18836.0 |
| fimbrial protein | HMPREF3212_04266 | Not Available | Positive | 4200482 - 4201030 | 20159.8 |
| putative outer membrane usher protein papc | HMPREF3212_04267 | Not Available | Positive | 4201072 - 4203543 | 91294.4 |
| gram-negative pili assembly chaperone domain protein | HMPREF3212_04268 | Not Available | Positive | 4203558 - 4204346 | 28993.2 |
| fimbrial protein | HMPREF3212_04269 | Not Available | Positive | 4204359 - 4204964 | 22056.7 |
| fimbrial family protein | HMPREF3212_04270 | Not Available | Positive | 4204961 - 4206025 | 38239.0 |
| fimbrial protein | HMPREF3212_04271 | Not Available | Positive | 4206035 - 4206577 | 19336.9 |
| o-antigen polymerase | HMPREF3212_04272 | Not Available | Positive | 4206579 - 4208246 | 62255.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

