Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate binding domain protein | HMPREF3212_04253 | Not Available | Negative | 4189320 - 4190234 | 33949.1 |
| transporter, major facilitator family protein | HMPREF3212_04254 | Not Available | Positive | 4190237 - 4191514 | 44557.0 |
| endonuclease/exonuclease/phosphatase family protein | HMPREF3212_04255 | Not Available | Positive | 4191667 - 4192446 | 29077.2 |
| methyltransferase domain protein | HMPREF3212_04256 | Not Available | Positive | 4192481 - 4193293 | 29843.3 |
| transglycosylase slt domain protein | HMPREF3212_04257 | Not Available | Negative | 4193343 - 4194701 | 49425.2 |
| hydroxyacylglutathione hydrolase | HMPREF3212_04258 | Not Available | Negative | 4194773 - 4195528 | 28662.4 |
| methyltransferase domain protein | HMPREF3212_04259 | Not Available | Positive | 4195562 - 4196284 | 27317.5 |
| ribonuclease hi | HMPREF3212_04260 | Not Available | Negative | 4196281 - 4196748 | 17575.9 |
| dna polymerase iii, epsilon subunit | HMPREF3212_04261 | Not Available | Positive | 4196804 - 4197541 | 27481.9 |
| Trna-asp | Not Available | Not Available | Positive | 4197676 - 4197752 | Not Available |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

