Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase domain protein | HMPREF3212_04243 | Not Available | Positive | 4180658 - 4181080 | 15624.9 |
| lipoprotein nlpe | HMPREF3212_04244 | Not Available | Positive | 4181231 - 4181809 | 21406.3 |
| proline--trna ligase | HMPREF3212_04245 | Not Available | Negative | 4181854 - 4183572 | 63641.3 |
| methyltransferase, yaeb family | HMPREF3212_04246 | Not Available | Negative | 4183686 - 4184393 | 26663.0 |
| outer membrane lipoprotein | HMPREF3212_04247 | Not Available | Negative | 4184390 - 4184743 | 12370.8 |
| d-methionine-binding lipoprotein metq | HMPREF3212_04248 | Not Available | Negative | 4184911 - 4185726 | 29433.3 |
| d-methionine transport system permease protein meti | HMPREF3212_04249 | Not Available | Negative | 4185771 - 4186424 | 23292.6 |
| d-methionine abc transporter, atp-binding protein | HMPREF3212_04250 | Not Available | Negative | 4186417 - 4187448 | 37770.6 |
| d,d-heptose 1,7-bisphosphate phosphatase | HMPREF3212_04251 | Not Available | Positive | 4187638 - 4188204 | 21008.1 |
| akr5d protein | HMPREF3212_04252 | Not Available | Positive | 4188465 - 4189298 | 30320.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

