Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | HMPREF3212_04233 | Not Available | Positive | 4169148 - 4170296 | 42458.1 |
| ribonuclease hii | HMPREF3212_04234 | Not Available | Positive | 4170293 - 4170889 | 21437.1 |
| dna polymerase iii subunit alpha | HMPREF3212_04235 | Not Available | Positive | 4170962 - 4174396 | 128217.0 |
| acetyl-coa carboxylase, carboxyl transferase, alpha subunit | HMPREF3212_04236 | Not Available | Positive | 4174409 - 4175368 | 35301.6 |
| lysine decarboxylase, constitutive | HMPREF3212_04237 | Not Available | Positive | 4175468 - 4177606 | 80494.6 |
| glyoxalase family protein | HMPREF3212_04238 | Not Available | Positive | 4177673 - 4178062 | 14710.6 |
| trna(ile)-lysidine synthetase | HMPREF3212_04239 | Not Available | Positive | 4178124 - 4179416 | 47970.6 |
| modulator of rho-dependent transcription termination | HMPREF3212_04240 | Not Available | Negative | 4179480 - 4179734 | 9371.06 |
| hypothetical protein | HMPREF3212_04241 | Not Available | Negative | 4179727 - 4179945 | 7759.27 |
| yaeq protein | HMPREF3212_04242 | Not Available | Positive | 4180116 - 4180661 | 20912.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

