Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | HMPREF3212_04223 | Not Available | Positive | 4158663 - 4159220 | 20551.6 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HMPREF3212_04224 | Not Available | Positive | 4159331 - 4160527 | 43392.4 |
| di-trans,poly-cis-decaprenylcistransferase | HMPREF3212_04225 | Not Available | Positive | 4160784 - 4161473 | 25979.8 |
| phosphatidate cytidylyltransferase | HMPREF3212_04226 | Not Available | Positive | 4161486 - 4162343 | 31457.6 |
| rip metalloprotease rsep | HMPREF3212_04227 | Not Available | Positive | 4162355 - 4163707 | 49186.2 |
| outer membrane protein assembly complex, yaet protein | HMPREF3212_04228 | Not Available | Positive | 4163737 - 4166160 | 89719.6 |
| dna-binding protein | HMPREF3212_04229 | Not Available | Positive | 4166217 - 4166768 | 20015.0 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | HMPREF3212_04230 | Not Available | Positive | 4166772 - 4167797 | 35965.5 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | HMPREF3212_04231 | Not Available | Positive | 4167901 - 4168356 | 17043.0 |
| putative acyl-[acyl-carrier-protein]-udp-n-acetylglucosamine o-acyltransferase | HMPREF3212_04232 | Not Available | Positive | 4168666 - 4169148 | 17171.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

