Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | HMPREF3212_04212 | Not Available | Positive | 4146209 - 4147726 | 59437.0 |
| peptidase do | HMPREF3212_04213 | Not Available | Positive | 4147856 - 4149289 | 49450.6 |
| carbohydrate diacid regulator | HMPREF3212_04214 | Not Available | Positive | 4149383 - 4150594 | 45706.8 |
| hypothetical protein | HMPREF3212_04215 | Not Available | Negative | 4150682 - 4151068 | 15083.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HMPREF3212_04216 | Not Available | Negative | 4151178 - 4152002 | 29878.8 |
| protein-p-ii uridylyltransferase | HMPREF3212_04217 | Not Available | Negative | 4152034 - 4154706 | 102432.0 |
| methionine aminopeptidase, type i | HMPREF3212_04218 | Not Available | Negative | 4154820 - 4155614 | 29212.3 |
| ribosomal protein s2 | HMPREF3212_04220 | Not Available | Positive | 4155939 - 4156664 | 26804.2 |
| translation elongation factor ts | HMPREF3212_04221 | Not Available | Positive | 4156729 - 4157652 | 33218.0 |
| ump kinase | HMPREF3212_04222 | Not Available | Positive | 4157798 - 4158523 | 25984.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

