Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp reductase | HMPREF3212_04152 | Not Available | Positive | 4081392 - 4082435 | 37203.7 |
| bacterial type ii secretion system protein f domain protein | HMPREF3212_04153 | Not Available | Negative | 4082492 - 4083694 | 44374.8 |
| type 4 fimbrial assembly protein pilb family protein | HMPREF3212_04154 | Not Available | Negative | 4083684 - 4085066 | 50519.1 |
| prepilin-type cleavage/methylation protein | HMPREF3212_04155 | Not Available | Negative | 4085076 - 4085513 | 15753.9 |
| hypothetical protein | HMPREF3212_04156 | Not Available | Positive | 4085585 - 4085713 | 4672.76 |
| nicotinate-nucleotide diphosphorylase | HMPREF3212_04157 | Not Available | Negative | 4085757 - 4086692 | 34580.1 |
| protein ampd | HMPREF3212_04158 | Not Available | Positive | 4086738 - 4087301 | 20848.5 |
| protein ampe | HMPREF3212_04159 | Not Available | Positive | 4087298 - 4088152 | 32112.8 |
| glycosyl hydrolase, family 43 | HMPREF3212_04160 | Not Available | Negative | 4088245 - 4089195 | 36574.7 |
| transporter, major facilitator family protein | HMPREF3212_04161 | Not Available | Negative | 4089195 - 4090601 | 52968.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

