Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase, large subunit | HMPREF3212_04122 | Not Available | Negative | 4047485 - 4048885 | 49749.5 |
| 3-isopropylmalate dehydrogenase | HMPREF3212_04123 | Not Available | Negative | 4048888 - 4049979 | 39428.1 |
| 2-isopropylmalate synthase | HMPREF3212_04124 | Not Available | Negative | 4049979 - 4051550 | 57454.3 |
| hypothetical protein | HMPREF3212_04125 | Not Available | Negative | 4051869 - 4051988 | 4804.95 |
| leucine transcriptional activator | HMPREF3212_04126 | Not Available | Positive | 4052304 - 4053329 | 38805.6 |
| acetolactate synthase, large subunit | HMPREF3212_04127 | Not Available | Positive | 4053648 - 4055372 | 63028.1 |
| acetolactate synthase, small subunit | HMPREF3212_04128 | Not Available | Positive | 4055375 - 4055866 | 18062.0 |
| fructose repressor | HMPREF3212_04129 | Not Available | Positive | 4055999 - 4057051 | 39909.8 |
| protein mraz | HMPREF3212_04130 | Not Available | Positive | 4057629 - 4058123 | 18678.6 |
| s-adenosyl-methyltransferase mraw | HMPREF3212_04131 | Not Available | Positive | 4058125 - 4059066 | 34684.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

