Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter, atp-binding protein | HMPREF3212_04111 | Not Available | Negative | 4036489 - 4037187 | 25175.8 |
| thiamine/thiamine pyrophosphate abc transporter, permease protein | HMPREF3212_04112 | Not Available | Negative | 4037171 - 4038781 | 59627.9 |
| thiamine/thiamine pyrophosphate abc transporter, thiamine/thiamine pyrophospate-binding protein | HMPREF3212_04113 | Not Available | Negative | 4038757 - 4039803 | 38737.5 |
| hth-type transcriptional regulator sgrr | HMPREF3212_04114 | Not Available | Negative | 4039928 - 4041583 | 64012.8 |
| sugar efflux transporter a | HMPREF3212_04116 | Not Available | Positive | 4041972 - 4043363 | 50812.0 |
| hypothetical protein | HMPREF3212_04117 | Not Available | Positive | 4043387 - 4043533 | 5429.87 |
| gluconate 5-dehydrogenase | HMPREF3212_04118 | Not Available | Positive | 4043642 - 4044406 | 27397.9 |
| transporter, major facilitator family protein | HMPREF3212_04119 | Not Available | Positive | 4044444 - 4045748 | 48350.3 |
| hth-type transcriptional regulator idnr | HMPREF3212_04120 | Not Available | Positive | 4045810 - 4046823 | 37541.2 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF3212_04121 | Not Available | Negative | 4046869 - 4047474 | 22558.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

