Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate reductase | HMPREF3212_04071 | Not Available | Positive | 3991424 - 3992245 | 28836.5 |
| carbamoyl-phosphate synthase, small subunit | HMPREF3212_04072 | Not Available | Positive | 3992674 - 3993849 | 42275.2 |
| carbamoyl-phosphate synthase, large subunit | HMPREF3212_04073 | Not Available | Positive | 3993867 - 3997094 | 118020.0 |
| transcriptional activatory protein caif | HMPREF3212_04074 | Not Available | Positive | 3997368 - 3997763 | 15347.9 |
| bacterial transferase hexapeptide repeat protein | HMPREF3212_04075 | Not Available | Negative | 3997839 - 3998435 | 21439.8 |
| carnitinyl-coa dehydratase | HMPREF3212_04076 | Not Available | Negative | 3998442 - 3999227 | 28144.7 |
| putative crotonobetaine/carnitine-coa ligase | HMPREF3212_04077 | Not Available | Negative | 3999282 - 4000835 | 58313.0 |
| crotonobetainyl-coa:carnitine coa-transferase | HMPREF3212_04078 | Not Available | Negative | 4000898 - 4002100 | 44331.3 |
| crotonobetainyl-coa dehydrogenase | HMPREF3212_04079 | Not Available | Negative | 4002227 - 4003369 | 42485.7 |
| l-carnitine/gamma-butyrobetaine antiporter | HMPREF3212_04080 | Not Available | Negative | 4003404 - 4004921 | 56658.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

