Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon repressor | HMPREF3212_04031 | Not Available | Positive | 3947375 - 3947701 | 12466.0 |
| inosine/xanthosine triphosphatase | HMPREF3212_04032 | Not Available | Negative | 3947757 - 3948272 | 18693.2 |
| phosphoglycerate mutase | HMPREF3212_04033 | Not Available | Positive | 3948344 - 3948991 | 23907.5 |
| right origin-binding protein | HMPREF3212_04034 | Not Available | Negative | 3948988 - 3949857 | 33125.8 |
| protein crea | HMPREF3212_04035 | Not Available | Positive | 3950069 - 3950542 | 17067.7 |
| response regulator receiver domain protein | HMPREF3212_04036 | Not Available | Positive | 3950555 - 3951244 | 26240.9 |
| sensor protein crec | HMPREF3212_04037 | Not Available | Positive | 3951244 - 3952668 | 51960.7 |
| inner membrane protein cred | HMPREF3212_04038 | Not Available | Positive | 3952726 - 3954087 | 50076.9 |
| aerobic respiration control protein arca | HMPREF3212_04039 | Not Available | Negative | 3954148 - 3954864 | 27292.7 |
| rna methyltransferase, trmh family, group 1 | HMPREF3212_04040 | Not Available | Positive | 3955499 - 3956185 | 25559.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

