Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | HMPREF3212_04021 | Not Available | Positive | 3934136 - 3935509 | 48853.9 |
| phosphopentomutase | HMPREF3212_04022 | Not Available | Positive | 3935549 - 3936784 | 44739.9 |
| purine nucleoside phosphorylase | HMPREF3212_04023 | Not Available | Positive | 3936888 - 3937607 | 25980.5 |
| lipoate--protein ligase | HMPREF3212_04024 | Not Available | Negative | 3937758 - 3938774 | 37968.9 |
| putative protein smp | HMPREF3212_04025 | Not Available | Negative | 3938812 - 3939453 | 23924.1 |
| phosphoserine phosphatase serb | HMPREF3212_04026 | Not Available | Positive | 3939569 - 3940537 | 35020.8 |
| dna repair protein rada | HMPREF3212_04027 | Not Available | Positive | 3940549 - 3941931 | 49460.1 |
| nicotinamide-nucleotide adenylyltransferase | HMPREF3212_04028 | Not Available | Positive | 3941918 - 3943249 | 50940.7 |
| atp-binding cassette protein, chvd family | HMPREF3212_04029 | Not Available | Negative | 3943349 - 3944995 | 61484.3 |
| soluble lytic murein transglycosylase | HMPREF3212_04030 | Not Available | Positive | 3945348 - 3947285 | 73433.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

