Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine acetyltransferase | HMPREF3212_04011 | Not Available | Positive | 3924605 - 3925051 | 16709.9 |
| had hydrolase family | HMPREF3212_04012 | Not Available | Positive | 3925063 - 3925746 | 25614.4 |
| peptide chain release factor 3 | HMPREF3212_04013 | Not Available | Positive | 3925839 - 3927428 | 59762.9 |
| phospholipid-binding domain protein | HMPREF3212_04014 | Not Available | Positive | 3927737 - 3928354 | 21424.3 |
| hypothetical protein | HMPREF3212_04015 | Not Available | Positive | 3928464 - 3928643 | 6259.15 |
| phospholipase, patatin family | HMPREF3212_04016 | Not Available | Positive | 3928837 - 3929838 | 36920.4 |
| hydrolase, tatd family | HMPREF3212_04017 | Not Available | Positive | 3929835 - 3930611 | 29032.9 |
| glycine radical enzyme activase, yjjw family | HMPREF3212_04018 | Not Available | Negative | 3930648 - 3931259 | 22404.2 |
| glycine radical enzyme, yjji family | HMPREF3212_04019 | Not Available | Negative | 3931483 - 3933069 | 59371.9 |
| deoxyribose-phosphate aldolase | HMPREF3212_04020 | Not Available | Positive | 3933277 - 3934074 | 28371.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

