Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_03951 | Not Available | Positive | 3873588 - 3873734 | 5567.68 |
| hypothetical protein | HMPREF3212_03953 | Not Available | Negative | 3873801 - 3873962 | 6179.74 |
| putative outer membrane protein | HMPREF3212_03952 | Not Available | Positive | 3873926 - 3874933 | 36459.6 |
| hypothetical protein | HMPREF3212_03954 | Not Available | Negative | 3875031 - 3875171 | 5536.65 |
| hypothetical protein | HMPREF3212_03955 | Not Available | Negative | 3875318 - 3876505 | 41780.7 |
| acetyltransferase, gnat family | HMPREF3212_03956 | Not Available | Negative | 3876603 - 3877067 | 17863.3 |
| hypothetical protein | HMPREF3212_03957 | Not Available | Negative | 3877081 - 3878361 | 48042.3 |
| lysr substrate binding domain protein | HMPREF3212_03958 | Not Available | Negative | 3878437 - 3879363 | 34586.5 |
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | HMPREF3212_03959 | Not Available | Positive | 3879583 - 3880815 | 43077.4 |
| cystathionine beta-lyase | HMPREF3212_03960 | Not Available | Positive | 3880846 - 3882036 | 43498.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

