Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | HMPREF3212_03910 | Not Available | Positive | 3832762 - 3833214 | 16781.1 |
| ornithine carbamoyltransferase | HMPREF3212_03912 | Not Available | Negative | 3833321 - 3834325 | 36726.1 |
| hypothetical protein | HMPREF3212_03913 | Not Available | Positive | 3834489 - 3834914 | 15962.8 |
| pp_03834 | HMPREF3212_03914 | Not Available | Positive | 3834966 - 3835724 | Not Available |
| hypothetical protein | HMPREF3212_03915 | Not Available | Positive | 3835888 - 3836718 | 30670.8 |
| acetyltransferase, gnat family | HMPREF3212_03916 | Not Available | Negative | 3836745 - 3837443 | 25054.3 |
| valine--trna ligase | HMPREF3212_03917 | Not Available | Negative | 3837468 - 3840323 | 107982.0 |
| dna polymerase iii subunit chi | HMPREF3212_03918 | Not Available | Negative | 3840323 - 3840766 | 16533.5 |
| leucyl aminopeptidase | HMPREF3212_03919 | Not Available | Negative | 3840885 - 3842396 | 54876.0 |
| lipopolysaccharide export system permease protein lptf | HMPREF3212_03920 | Not Available | Positive | 3842663 - 3843763 | 40379.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

