Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter, permease protein | HMPREF3212_03871 | Not Available | Positive | 3794053 - 3795015 | 33136.2 |
| branched-chain amino acid abc transporter, permease protein | HMPREF3212_03872 | Not Available | Positive | 3795002 - 3796003 | 35139.1 |
| methyl-accepting chemotaxis protein signaling domain protein | HMPREF3212_03873 | Not Available | Positive | 3796188 - 3797219 | 36907.8 |
| fructose-1,6-bisphosphatase | HMPREF3212_03874 | Not Available | Negative | 3797334 - 3798515 | 43699.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | HMPREF3212_03875 | Not Available | Positive | 3798544 - 3799887 | 48729.4 |
| hypothetical protein | HMPREF3212_03876 | Not Available | Negative | 3799995 - 3800546 | 21371.5 |
| protein pmba | HMPREF3212_03877 | Not Available | Positive | 3800573 - 3801994 | 51260.1 |
| soluble cytochrome b562 | HMPREF3212_03878 | Not Available | Positive | 3802041 - 3802427 | 13986.8 |
| prd domain protein, ef_0829/aha_3910 family | HMPREF3212_03879 | Not Available | Positive | 3802760 - 3803068 | 11381.5 |
| ef_0830/aha_3911 family protein | HMPREF3212_03880 | Not Available | Positive | 3803079 - 3803441 | 12457.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

