Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_03841 | Not Available | Positive | 3763565 - 3764350 | 28341.8 |
| ribosomal protein s6 | HMPREF3212_03842 | Not Available | Positive | 3764509 - 3764904 | 15160.8 |
| single-strand binding family protein | HMPREF3212_03843 | Not Available | Positive | 3764911 - 3765225 | 11329.7 |
| ribosomal protein s18 | HMPREF3212_03844 | Not Available | Positive | 3765230 - 3765457 | 8986.94 |
| ribosomal protein l9 | HMPREF3212_03845 | Not Available | Positive | 3765499 - 3765948 | 15774.9 |
| putative membrane protein | HMPREF3212_03846 | Not Available | Positive | 3766091 - 3767014 | 33123.1 |
| opacity-associated protein a | HMPREF3212_03847 | Not Available | Negative | 3767044 - 3767694 | 23654.1 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type | HMPREF3212_03848 | Not Available | Positive | 3767866 - 3768534 | 23999.7 |
| d-serine/d-alanine/glycine transporter | HMPREF3212_03849 | Not Available | Positive | 3768844 - 3770253 | 51606.6 |
| iron-sulfur cluster repair di-iron protein | HMPREF3212_03850 | Not Available | Negative | 3770337 - 3770999 | 24930.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

