Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 3735086 - 3735161 | Not Available |
| putative iron-sulfur cluster-binding protein | HMPREF3212_03813 | Not Available | Negative | 3735431 - 3736570 | 43079.3 |
| yjef domain protein | HMPREF3212_03812 | Not Available | Positive | 3736569 - 3738116 | 54568.4 |
| hydrolase, p-loop family | HMPREF3212_03814 | Not Available | Positive | 3738088 - 3738549 | 16953.3 |
| n-acetylmuramoyl-l-alanine amidase | HMPREF3212_03815 | Not Available | Positive | 3738566 - 3739897 | 47438.2 |
| dna mismatch repair protein | HMPREF3212_03816 | Not Available | Positive | 3739907 - 3741772 | 68278.8 |
| trna dimethylallyltransferase | HMPREF3212_03817 | Not Available | Positive | 3741765 - 3742715 | 35124.1 |
| rna chaperone hfq | HMPREF3212_03818 | Not Available | Positive | 3742800 - 3743108 | 11137.0 |
| gtp-binding protein hflx | HMPREF3212_03819 | Not Available | Positive | 3743183 - 3744463 | 48270.9 |
| hflk protein | HMPREF3212_03820 | Not Available | Positive | 3744653 - 3745906 | 45512.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

