Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter dcua | HMPREF3212_03781 | Not Available | Negative | 3706978 - 3708279 | 45713.6 |
| aspartate ammonia-lyase | HMPREF3212_03782 | Not Available | Negative | 3708395 - 3709873 | 53788.1 |
| fxsa protein | HMPREF3212_03783 | Not Available | Positive | 3710170 - 3710646 | 17667.2 |
| amino acid permease | HMPREF3212_03784 | Not Available | Negative | 3710696 - 3711961 | 45176.7 |
| chaperonin gros | HMPREF3212_03785 | Not Available | Positive | 3712012 - 3712530 | 18541.6 |
| chaperonin grol | HMPREF3212_03786 | Not Available | Positive | 3712574 - 3714220 | 57247.3 |
| hypothetical protein | HMPREF3212_03787 | Not Available | Positive | 3714343 - 3714708 | 12387.7 |
| hypothetical protein | HMPREF3212_03788 | Not Available | Negative | 3714709 - 3714888 | 6786.26 |
| hypothetical protein | HMPREF3212_03789 | Not Available | Negative | 3714888 - 3715751 | 32754.4 |
| lysine-2,3-aminomutase protein | HMPREF3212_03790 | Not Available | Negative | 3715936 - 3716964 | 38615.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

