Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase | HMPREF3212_03761 | Not Available | Positive | 3688491 - 3690506 | 73655.3 |
| hypothetical protein | HMPREF3212_03762 | Not Available | Positive | 3690508 - 3690726 | 8399.52 |
| sodium bile acid symporter family protein | HMPREF3212_03763 | Not Available | Negative | 3690723 - 3691721 | 36038.4 |
| lysr substrate binding domain protein | HMPREF3212_03764 | Not Available | Positive | 3691811 - 3692737 | 34176.2 |
| hypothetical protein | HMPREF3212_03765 | Not Available | Negative | 3692763 - 3693524 | 29098.6 |
| xanthosine phosphorylase | HMPREF3212_03766 | Not Available | Positive | 3693780 - 3694613 | 29465.8 |
| nucleoside permease nupg | HMPREF3212_03767 | Not Available | Positive | 3694670 - 3695926 | 45992.2 |
| xapx domain protein | HMPREF3212_03768 | Not Available | Positive | 3695984 - 3696142 | 5633.3 |
| lysr substrate binding domain protein | HMPREF3212_03769 | Not Available | Positive | 3696194 - 3697078 | 33082.7 |
| Trna-lys | Not Available | Not Available | Positive | 3697372 - 3697447 | Not Available |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

