Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m48 family | HMPREF3212_03691 | Not Available | Negative | 3624223 - 3625860 | 60869.4 |
| hypothetical protein | HMPREF3212_03692 | Not Available | Positive | 3625913 - 3626977 | 39374.1 |
| transporter gate domain protein | HMPREF3212_03693 | Not Available | Positive | 3627144 - 3627803 | 23436.7 |
| transporter gate domain protein | HMPREF3212_03694 | Not Available | Positive | 3627805 - 3628266 | 16024.4 |
| beta-aspartyl peptidase | HMPREF3212_03695 | Not Available | Positive | 3628278 - 3629441 | 41157.8 |
| thioredoxin-dependent thiol peroxidase | HMPREF3212_03696 | Not Available | Negative | 3629595 - 3630065 | 17625.9 |
| putative glycine cleavage system transcriptional repressor | HMPREF3212_03697 | Not Available | Negative | 3630065 - 3630511 | 16286.4 |
| dihydrodipicolinate synthase | HMPREF3212_03698 | Not Available | Positive | 3630783 - 3631661 | 31289.0 |
| lipoprotein 34 | HMPREF3212_03699 | Not Available | Positive | 3631678 - 3632712 | 36886.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HMPREF3212_03700 | Not Available | Positive | 3632752 - 3633537 | 29856.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

