Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna methyltransferase | HMPREF3212_03660 | Not Available | Positive | 3583171 - 3584337 | 43470.6 |
| cytoskeleton protein rodz | HMPREF3212_03661 | Not Available | Positive | 3584622 - 3585614 | 35447.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | HMPREF3212_03662 | Not Available | Positive | 3585641 - 3586759 | 40715.2 |
| histidine--trna ligase | HMPREF3212_03664 | Not Available | Positive | 3586870 - 3588144 | 47004.1 |
| hypothetical protein | HMPREF3212_03665 | Not Available | Positive | 3588113 - 3588778 | 23896.3 |
| outer membrane assembly lipoprotein yfgl | HMPREF3212_03666 | Not Available | Positive | 3588789 - 3589967 | 41756.4 |
| ribosome biogenesis gtpase der | HMPREF3212_03667 | Not Available | Positive | 3590043 - 3591557 | 56528.0 |
| hypothetical protein | HMPREF3212_03668 | Not Available | Negative | 3591755 - 3591904 | 5891.08 |
| amino acid/peptide transporter | HMPREF3212_03669 | Not Available | Positive | 3591938 - 3593398 | 52432.9 |
| hypothetical protein | HMPREF3212_03670 | Not Available | Positive | 3593552 - 3594496 | 34639.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

