Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine hydroxymethyltransferase | HMPREF3212_03619 | Not Available | Positive | 3538540 - 3539799 | 45771.9 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--nad(+) reductase component | HMPREF3212_03620 | Not Available | Negative | 3539892 - 3541094 | 43498.4 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | HMPREF3212_03621 | Not Available | Negative | 3541104 - 3541916 | 28473.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | HMPREF3212_03622 | Not Available | Negative | 3541913 - 3542233 | 11306.2 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | HMPREF3212_03623 | Not Available | Negative | 3542233 - 3542751 | 20500.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | HMPREF3212_03624 | Not Available | Negative | 3542748 - 3544109 | 51060.6 |
| hca operon transcriptional activator | HMPREF3212_03625 | Not Available | Positive | 3544212 - 3545138 | 34192.7 |
| rok family protein | HMPREF3212_03626 | Not Available | Negative | 3545142 - 3546335 | 44180.8 |
| tetratricopeptide repeat protein | HMPREF3212_03627 | Not Available | Positive | 3546450 - 3549716 | 123067.0 |
| mfs transporter, sp family | HMPREF3212_03628 | Not Available | Positive | 3549790 - 3551229 | 51569.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

