Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase, family if | HMPREF3212_03608 | Not Available | Positive | 3525466 - 3526101 | 24311.6 |
| cytidine and deoxycytidylate deaminase zinc-binding region | HMPREF3212_03609 | Not Available | Positive | 3526191 - 3526655 | 17124.9 |
| membrane-bound lytic murein transglycosylase f | HMPREF3212_03610 | Not Available | Negative | 3526668 - 3528218 | 58122.8 |
| phosphoribosylformylglycinamidine synthase | HMPREF3212_03611 | Not Available | Positive | 3528421 - 3532362 | 143644.0 |
| hypothetical protein | HMPREF3212_03612 | Not Available | Negative | 3532607 - 3532768 | 6210.6 |
| hypothetical protein | HMPREF3212_03614 | Not Available | Positive | 3534472 - 3535194 | 27079.0 |
| putative response regulator/sigma54 interaction protein | HMPREF3212_03615 | Not Available | Positive | 3535191 - 3536528 | 49302.5 |
| nitrogen regulatory protein p-ii | HMPREF3212_03616 | Not Available | Positive | 3536589 - 3536927 | 12430.2 |
| flavohemoprotein | HMPREF3212_03617 | Not Available | Negative | 3537029 - 3538219 | 43686.9 |
| hypothetical protein | HMPREF3212_03618 | Not Available | Negative | 3538267 - 3538443 | 6913.38 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

