Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnk | HMPREF3212_03537 | Not Available | Negative | 3456853 - 3457611 | 27772.5 |
| phosphonate metabolism protein phnj | HMPREF3212_03538 | Not Available | Negative | 3457608 - 3458456 | 32049.3 |
| bacterial phosphonate metabolism protein phni | HMPREF3212_03539 | Not Available | Negative | 3458446 - 3459513 | 39000.1 |
| phosphonate c-p lyase system protein phnh | HMPREF3212_03540 | Not Available | Negative | 3459513 - 3460097 | 20937.4 |
| phosphonate c-p lyase system protein phng | HMPREF3212_03541 | Not Available | Negative | 3460094 - 3460546 | 16805.1 |
| phosphonate metabolism transcriptional regulator phnf | HMPREF3212_03542 | Not Available | Negative | 3460547 - 3461272 | 27695.1 |
| phosphonate abc transporter, permease protein phne | HMPREF3212_03544 | Not Available | Negative | 3461293 - 3462072 | 28452.4 |
| hypothetical protein | HMPREF3212_03543 | Not Available | Positive | 3462071 - 3462196 | 4173.07 |
| phosphonate abc transporter, periplasmic phosphonate binding protein | HMPREF3212_03545 | Not Available | Negative | 3462177 - 3463193 | 37273.4 |
| phosphonate abc transporter, atp-binding protein | HMPREF3212_03546 | Not Available | Negative | 3463349 - 3464137 | 29295.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

