Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase, pentaheme subunit | HMPREF3212_03507 | Not Available | Positive | 3425968 - 3426534 | 20889.8 |
| cytochrome c nitrite reductase, fe-s protein | HMPREF3212_03508 | Not Available | Positive | 3426531 - 3427202 | 24431.4 |
| cytochrome c nitrite reductase, nrfd subunit | HMPREF3212_03509 | Not Available | Positive | 3427199 - 3428155 | 35189.5 |
| cytochrome c-type biogenesis protein ccmf | HMPREF3212_03510 | Not Available | Positive | 3428278 - 3429891 | 60368.1 |
| cytochrome c nitrite reductase, accessory protein nrff | HMPREF3212_03511 | Not Available | Positive | 3429884 - 3430390 | 18735.7 |
| formate-dependent nitrite reductase complex subunit nrfg | HMPREF3212_03512 | Not Available | Positive | 3430390 - 3431001 | 22921.9 |
| hypothetical protein | HMPREF3212_03513 | Not Available | Negative | 3431138 - 3431269 | 5257.46 |
| proton/sodium-glutamate symport protein gltt | HMPREF3212_03514 | Not Available | Positive | 3431346 - 3432659 | 47153.2 |
| sel1 repeat protein | HMPREF3212_03515 | Not Available | Negative | 3432764 - 3433453 | 25115.5 |
| formate dehydrogenase, alpha subunit | HMPREF3212_03516 | Not Available | Negative | 3433557 - 3435236 | 62332.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

