Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase, class i/ii | HMPREF3212_03487 | Not Available | Positive | 3404095 - 3405288 | 43356.8 |
| had phosphatase, family iiib | HMPREF3212_03488 | Not Available | Positive | 3405537 - 3406250 | 26382.2 |
| hypothetical protein | HMPREF3212_03489 | Not Available | Positive | 3406336 - 3406734 | 15052.2 |
| excinuclease abc, a subunit | HMPREF3212_03490 | Not Available | Negative | 3406850 - 3409672 | 103703.0 |
| single-strand binding family protein | HMPREF3212_03491 | Not Available | Positive | 3409924 - 3410448 | 18608.8 |
| hypothetical protein | HMPREF3212_03492 | Not Available | Negative | 3410515 - 3410796 | 10274.9 |
| cyclic diguanylate phosphodiesterase domain protein | HMPREF3212_03493 | Not Available | Positive | 3411373 - 3412935 | 59457.9 |
| regulatory protein soxs | HMPREF3212_03494 | Not Available | Negative | 3412938 - 3413261 | 12961.6 |
| redox-sensitive transcriptional activator soxr | HMPREF3212_03495 | Not Available | Positive | 3413348 - 3413806 | 16853.4 |
| hypothetical protein | HMPREF3212_03496 | Not Available | Positive | 3414184 - 3414303 | 4576.81 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

