Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-sensing protein rspa | HMPREF3212_03457 | Not Available | Positive | 3376308 - 3377522 | 45869.8 |
| transporter, major facilitator family protein | HMPREF3212_03458 | Not Available | Positive | 3377583 - 3378917 | 48501.8 |
| mannitol dehydrogenase domain protein | HMPREF3212_03459 | Not Available | Positive | 3379081 - 3380547 | 53773.6 |
| putative selenium-binding protein ydfz | HMPREF3212_03461 | Not Available | Negative | 3380623 - 3380826 | 7373.9 |
| hypothetical protein | HMPREF3212_03460 | Not Available | Positive | 3380825 - 3381004 | 6696.29 |
| transcriptional regulator, gntr family | HMPREF3212_03462 | Not Available | Negative | 3381018 - 3381704 | 26469.7 |
| putative serine 3-dehydrogenase | HMPREF3212_03463 | Not Available | Negative | 3381791 - 3382537 | 27292.5 |
| peptidyl-dipeptidase dcp | HMPREF3212_03464 | Not Available | Positive | 3382675 - 3384720 | 77240.1 |
| hypothetical protein | HMPREF3212_03465 | Not Available | Positive | 3385009 - 3385227 | 8283.14 |
| diguanylate cyclase domain protein | HMPREF3212_03466 | Not Available | Positive | 3385425 - 3386351 | 35231.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

