Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thermostable carboxypeptidase 1 | HMPREF3212_03437 | Not Available | Negative | 3356704 - 3358191 | 55884.8 |
| ferric reductase like transmembrane component | HMPREF3212_03438 | Not Available | Negative | 3358239 - 3358865 | 23733.2 |
| tat pathway signal sequence domain protein | HMPREF3212_03439 | Not Available | Negative | 3358865 - 3359869 | 37583.0 |
| putative transcriptional regulatory protein walr | HMPREF3212_03440 | Not Available | Positive | 3360050 - 3360781 | 27688.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3212_03441 | Not Available | Positive | 3360778 - 3362268 | 55155.1 |
| caax amino terminal protease family protein | HMPREF3212_03442 | Not Available | Positive | 3362412 - 3363101 | 26051.9 |
| transporter, major facilitator family protein | HMPREF3212_03443 | Not Available | Negative | 3363132 - 3364283 | 41392.7 |
| lysr substrate binding domain protein | HMPREF3212_03444 | Not Available | Positive | 3364493 - 3365401 | 33658.0 |
| protein mlc | HMPREF3212_03445 | Not Available | Positive | 3365517 - 3366740 | 44262.8 |
| dethiobiotin synthase | HMPREF3212_03446 | Not Available | Positive | 3366866 - 3367561 | 24688.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

