Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF3212_03417 | Not Available | Negative | 3337624 - 3338925 | 49177.8 |
| hypothetical protein | HMPREF3212_03418 | Not Available | Negative | 3339154 - 3339672 | 19492.9 |
| hypothetical protein | HMPREF3212_03419 | Not Available | Negative | 3339669 - 3339839 | 6259.47 |
| hypothetical protein | HMPREF3212_03420 | Not Available | Positive | 3339907 - 3340251 | 12877.2 |
| metallo-beta-lactamase domain protein | HMPREF3212_03421 | Not Available | Negative | 3340278 - 3341069 | 29503.1 |
| aminoglycoside/hydroxyurea antibiotic resistance kinase | HMPREF3212_03422 | Not Available | Positive | 3341356 - 3342102 | 26961.4 |
| high-affinity nickel transport protein | HMPREF3212_03423 | Not Available | Positive | 3342218 - 3343246 | 37508.2 |
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | HMPREF3212_03424 | Not Available | Negative | 3343299 - 3344639 | 47076.2 |
| transcriptional regulatory protein rsta | HMPREF3212_03425 | Not Available | Negative | 3344886 - 3345677 | 29433.7 |
| glpm protein | HMPREF3212_03426 | Not Available | Positive | 3345748 - 3346083 | 12411.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

