Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator slya | HMPREF3212_03387 | Not Available | Positive | 3307631 - 3308071 | 16571.3 |
| outer membrane lipoprotein pcp | HMPREF3212_03388 | Not Available | Negative | 3308119 - 3308586 | 15513.7 |
| anhydro-n-acetylmuramic acid kinase | HMPREF3212_03389 | Not Available | Positive | 3308861 - 3309982 | 40093.5 |
| putative protein ydha | HMPREF3212_03390 | Not Available | Positive | 3310070 - 3310399 | 12531.2 |
| pyridoxamine 5'-phosphate oxidase | HMPREF3212_03391 | Not Available | Positive | 3310459 - 3311115 | 25422.4 |
| tyrosine--trna ligase | HMPREF3212_03392 | Not Available | Positive | 3311230 - 3312516 | 47875.9 |
| pyridoxal kinase | HMPREF3212_03393 | Not Available | Positive | 3312581 - 3313441 | 31040.6 |
| glutathione s-transferase | HMPREF3212_03394 | Not Available | Negative | 3313525 - 3314130 | 22483.2 |
| putative tripeptide transporter permease | HMPREF3212_03395 | Not Available | Negative | 3314235 - 3315770 | 55662.4 |
| endonuclease iii | HMPREF3212_03396 | Not Available | Negative | 3316350 - 3316985 | 23535.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

