Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gram-negative pili assembly chaperone domain protein | HMPREF3212_03347 | Not Available | Negative | 3271235 - 3271939 | 26231.1 |
| hypothetical protein | HMPREF3212_03348 | Not Available | Negative | 3272039 - 3272743 | 24881.6 |
| hypothetical protein | HMPREF3212_03349 | Not Available | Negative | 3272969 - 3273202 | 8981.84 |
| hypothetical protein | HMPREF3212_03350 | Not Available | Negative | 3273729 - 3273890 | 6333.82 |
| hth domain protein | HMPREF3212_03351 | Not Available | Positive | 3274241 - 3274930 | 26735.4 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3212_03352 | Not Available | Positive | 3275001 - 3275747 | 26646.3 |
| hypothetical protein | HMPREF3212_03353 | Not Available | Negative | 3275909 - 3276061 | 5786.99 |
| tryptophan--trna ligase | HMPREF3212_03354 | Not Available | Negative | 3276168 - 3277190 | 37338.3 |
| diguanylate cyclase domain protein | HMPREF3212_03355 | Not Available | Negative | 3277374 - 3279086 | 64039.2 |
| hypothetical protein | HMPREF3212_03356 | Not Available | Negative | 3279278 - 3280387 | 40318.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

